The Xylella fastidiosa-Resistant Olive Cultivar "Leccino" Has Stable Endophytic Microbiota during the Olive Quick Decline Syndrome (OQDS).
Identifieur interne : 000059 ( Main/Exploration ); précédent : 000058; suivant : 000060The Xylella fastidiosa-Resistant Olive Cultivar "Leccino" Has Stable Endophytic Microbiota during the Olive Quick Decline Syndrome (OQDS).
Auteurs : Marzia Vergine [Italie] ; Joana B. Meyer [Suisse] ; Massimiliano Cardinale [Italie] ; Erika Sabella [Italie] ; Martin Hartmann [Suisse] ; Paolo Cherubini [Suisse, Canada] ; Luigi De Bellis [Italie] ; Andrea Luvisi [Italie]Source :
- Pathogens (Basel, Switzerland) [ 2076-0817 ] ; 2019.
Abstract
Xylella fastidiosa is a highly virulent pathogen that causes Olive Quick Decline Syndrome (OQDS), which is currently devastating olive plantations in the Salento region (Apulia, Southern Italy). We explored the microbiome associated with X. fastidiosa-infected (Xf-infected) and -uninfected (Xf-uninfected) olive trees in Salento, to assess the level of dysbiosis and to get first insights into the potential role of microbial endophytes in protecting the host from the disease. The resistant cultivar "Leccino" was compared to the susceptible cultivar "Cellina di Nardò", in order to identify microbial taxa and parameters potentially involved in resistance mechanisms. Metabarcoding of 16S rRNA genes and fungal ITS2 was used to characterize both total and endophytic microbiota in olive branches and leaves. "Cellina di Nardò" showed a drastic dysbiosis after X. fastidiosa infection, while "Leccino" (both infected and uninfected) maintained a similar microbiota. The genus Pseudomonas dominated all "Leccino" and Xf-uninfected "Cellina di Nardò" trees, whereas Ammoniphilus prevailed in Xf-infected "Cellina di Nardò". Diversity of microbiota in Xf-uninfected "Leccino" was higher than in Xf-uninfected "Cellina di Nardò". Several bacterial taxa specifically associated with "Leccino" showed potential interactions with X. fastidiosa. The maintenance of a healthy microbiota with higher diversity and the presence of cultivar-specific microbes might support the resistance of "Leccino" to X. fastidiosa. Such beneficial bacteria might be isolated in the future for biological treatment of the OQDS.
DOI: 10.3390/pathogens9010035
PubMed: 31906093
PubMed Central: PMC7168594
Affiliations:
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Lecce</wicri:regionArea><wicri:noRegion>I-73100 Lecce</wicri:noRegion></affiliation></author><author><name sortKey="Meyer, Joana B" sort="Meyer, Joana B" uniqKey="Meyer J" first="Joana B" last="Meyer">Joana B. Meyer</name><affiliation wicri:level="1"><nlm:affiliation>Federal Office for the Environment FOEN, Worblentalstrasse 68, CH-3063 Ittigen, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Federal Office for the Environment FOEN, Worblentalstrasse 68, CH-3063 Ittigen</wicri:regionArea><wicri:noRegion>CH-3063 Ittigen</wicri:noRegion></affiliation></author><author><name sortKey="Cardinale, Massimiliano" sort="Cardinale, Massimiliano" uniqKey="Cardinale M" first="Massimiliano" last="Cardinale">Massimiliano Cardinale</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce</wicri:regionArea><wicri:noRegion>I-73100 Lecce</wicri:noRegion></affiliation></author><author><name sortKey="Sabella, Erika" sort="Sabella, Erika" uniqKey="Sabella E" first="Erika" last="Sabella">Erika Sabella</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce</wicri:regionArea><wicri:noRegion>I-73100 Lecce</wicri:noRegion></affiliation></author><author><name sortKey="Hartmann, Martin" sort="Hartmann, Martin" uniqKey="Hartmann M" first="Martin" last="Hartmann">Martin Hartmann</name><affiliation wicri:level="1"><nlm:affiliation>Sustainable Agroecosystems, Institute of Agricultural Sciences, Department of Environmental Systems Science, ETH Zurich, Universitätsstrasse 2, CH-8092 Zurich, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Sustainable Agroecosystems, Institute of Agricultural Sciences, Department of Environmental Systems Science, ETH Zurich, Universitätsstrasse 2, CH-8092 Zurich</wicri:regionArea><wicri:noRegion>CH-8092 Zurich</wicri:noRegion></affiliation></author><author><name sortKey="Cherubini, Paolo" sort="Cherubini, Paolo" uniqKey="Cherubini P" first="Paolo" last="Cherubini">Paolo Cherubini</name><affiliation wicri:level="1"><nlm:affiliation>WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903 Birmensdorf, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903 Birmensdorf</wicri:regionArea><wicri:noRegion>CH-8903 Birmensdorf</wicri:noRegion></affiliation><affiliation wicri:level="4"><nlm:affiliation>Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, BC V6T 1Z4</wicri:regionArea><orgName type="university">Université de la Colombie-Britannique</orgName><placeName><settlement type="city">Vancouver</settlement><region type="state">Colombie-Britannique </region></placeName></affiliation></author><author><name sortKey="De Bellis, Luigi" sort="De Bellis, Luigi" uniqKey="De Bellis L" first="Luigi" last="De Bellis">Luigi De Bellis</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce</wicri:regionArea><wicri:noRegion>I-73100 Lecce</wicri:noRegion></affiliation></author><author><name sortKey="Luvisi, Andrea" sort="Luvisi, Andrea" uniqKey="Luvisi A" first="Andrea" last="Luvisi">Andrea Luvisi</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce</wicri:regionArea><wicri:noRegion>I-73100 Lecce</wicri:noRegion></affiliation></author></analytic><series><title level="j">Pathogens (Basel, Switzerland)</title><idno type="ISSN">2076-0817</idno><imprint><date when="2019" type="published">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><i>Xylella fastidiosa</i> is a highly virulent pathogen that causes Olive Quick Decline Syndrome (OQDS), which is currently devastating olive plantations in the Salento region (Apulia, Southern Italy). We explored the microbiome associated with <i>X. fastidiosa</i>-infected (<i>Xf</i>-infected) and -uninfected (<i>Xf</i>-uninfected) olive trees in Salento, to assess the level of dysbiosis and to get first insights into the potential role of microbial endophytes in protecting the host from the disease. The resistant cultivar "Leccino" was compared to the susceptible cultivar "Cellina di Nardò", in order to identify microbial taxa and parameters potentially involved in resistance mechanisms. Metabarcoding of 16S rRNA genes and fungal ITS2 was used to characterize both total and endophytic microbiota in olive branches and leaves. "Cellina di Nardò" showed a drastic dysbiosis after <i>X. fastidiosa</i> infection, while "Leccino" (both infected and uninfected) maintained a similar microbiota. The genus <i>Pseudomonas</i> dominated all "Leccino" and <i>Xf</i>-uninfected "Cellina di Nardò" trees, whereas <i>Ammoniphilus</i> prevailed in <i>Xf-</i>infected "Cellina di Nardò". Diversity of microbiota in <i>Xf</i>-uninfected "Leccino" was higher than in <i>Xf</i>-uninfected "Cellina di Nardò". Several bacterial taxa specifically associated with "Leccino" showed potential interactions with <i>X. fastidiosa</i>. The maintenance of a healthy microbiota with higher diversity and the presence of cultivar-specific microbes might support the resistance of "Leccino" to <i>X. fastidiosa</i>. Such beneficial bacteria might be isolated in the future for biological treatment of the OQDS.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">31906093</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>28</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Print">2076-0817</ISSN><JournalIssue CitedMedium="Print"><Volume>9</Volume><Issue>1</Issue><PubDate><Year>2019</Year><Month>Dec</Month><Day>31</Day></PubDate></JournalIssue><Title>Pathogens (Basel, Switzerland)</Title><ISOAbbreviation>Pathogens</ISOAbbreviation></Journal><ArticleTitle>The <i>Xylella fastidiosa</i>-Resistant Olive Cultivar "Leccino" Has Stable Endophytic Microbiota during the Olive Quick Decline Syndrome (OQDS).</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">E35</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.3390/pathogens9010035</ELocationID><Abstract><AbstractText><i>Xylella fastidiosa</i> is a highly virulent pathogen that causes Olive Quick Decline Syndrome (OQDS), which is currently devastating olive plantations in the Salento region (Apulia, Southern Italy). We explored the microbiome associated with <i>X. fastidiosa</i>-infected (<i>Xf</i>-infected) and -uninfected (<i>Xf</i>-uninfected) olive trees in Salento, to assess the level of dysbiosis and to get first insights into the potential role of microbial endophytes in protecting the host from the disease. The resistant cultivar "Leccino" was compared to the susceptible cultivar "Cellina di Nardò", in order to identify microbial taxa and parameters potentially involved in resistance mechanisms. Metabarcoding of 16S rRNA genes and fungal ITS2 was used to characterize both total and endophytic microbiota in olive branches and leaves. "Cellina di Nardò" showed a drastic dysbiosis after <i>X. fastidiosa</i> infection, while "Leccino" (both infected and uninfected) maintained a similar microbiota. The genus <i>Pseudomonas</i> dominated all "Leccino" and <i>Xf</i>-uninfected "Cellina di Nardò" trees, whereas <i>Ammoniphilus</i> prevailed in <i>Xf-</i>infected "Cellina di Nardò". Diversity of microbiota in <i>Xf</i>-uninfected "Leccino" was higher than in <i>Xf</i>-uninfected "Cellina di Nardò". Several bacterial taxa specifically associated with "Leccino" showed potential interactions with <i>X. fastidiosa</i>. The maintenance of a healthy microbiota with higher diversity and the presence of cultivar-specific microbes might support the resistance of "Leccino" to <i>X. fastidiosa</i>. Such beneficial bacteria might be isolated in the future for biological treatment of the OQDS.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Vergine</LastName><ForeName>Marzia</ForeName><Initials>M</Initials><Identifier Source="ORCID">0000-0003-3122-2389</Identifier><AffiliationInfo><Affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Meyer</LastName><ForeName>Joana B</ForeName><Initials>JB</Initials><AffiliationInfo><Affiliation>Federal Office for the Environment FOEN, Worblentalstrasse 68, CH-3063 Ittigen, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cardinale</LastName><ForeName>Massimiliano</ForeName><Initials>M</Initials><Identifier Source="ORCID">0000-0003-1421-722X</Identifier><AffiliationInfo><Affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sabella</LastName><ForeName>Erika</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hartmann</LastName><ForeName>Martin</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Sustainable Agroecosystems, Institute of Agricultural Sciences, Department of Environmental Systems Science, ETH Zurich, Universitätsstrasse 2, CH-8092 Zurich, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cherubini</LastName><ForeName>Paolo</ForeName><Initials>P</Initials><Identifier Source="ORCID">0000-0002-9809-250X</Identifier><AffiliationInfo><Affiliation>WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903 Birmensdorf, Switzerland.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>De Bellis</LastName><ForeName>Luigi</ForeName><Initials>L</Initials><Identifier Source="ORCID">0000-0002-6047-3526</Identifier><AffiliationInfo><Affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Luvisi</LastName><ForeName>Andrea</ForeName><Initials>A</Initials><Identifier Source="ORCID">0000-0002-2207-7493</Identifier><AffiliationInfo><Affiliation>Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Monteroni, I-73100 Lecce, Italy.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>12</Month><Day>31</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Pathogens</MedlineTA><NlmUniqueID>101596317</NlmUniqueID><ISSNLinking>2076-0817</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Olea europaea microbiota</Keyword><Keyword MajorTopicYN="N">Xylella fastidiosa</Keyword><Keyword MajorTopicYN="N">endophytes</Keyword><Keyword MajorTopicYN="N">plant microbiome modulation</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2019</Year><Month>11</Month><Day>05</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2019</Year><Month>12</Month><Day>20</Day></PubMedPubDate><PubMedPubDate 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Cardinale</name><name sortKey="De Bellis, Luigi" sort="De Bellis, Luigi" uniqKey="De Bellis L" first="Luigi" last="De Bellis">Luigi De Bellis</name><name sortKey="Luvisi, Andrea" sort="Luvisi, Andrea" uniqKey="Luvisi A" first="Andrea" last="Luvisi">Andrea Luvisi</name><name sortKey="Sabella, Erika" sort="Sabella, Erika" uniqKey="Sabella E" first="Erika" last="Sabella">Erika Sabella</name></country><country name="Suisse"><noRegion><name sortKey="Meyer, Joana B" sort="Meyer, Joana B" uniqKey="Meyer J" first="Joana B" last="Meyer">Joana B. Meyer</name></noRegion><name sortKey="Cherubini, Paolo" sort="Cherubini, Paolo" uniqKey="Cherubini P" first="Paolo" last="Cherubini">Paolo Cherubini</name><name sortKey="Hartmann, Martin" sort="Hartmann, Martin" uniqKey="Hartmann M" first="Martin" last="Hartmann">Martin Hartmann</name></country><country name="Canada"><region name="Colombie-Britannique "><name sortKey="Cherubini, Paolo" sort="Cherubini, Paolo" uniqKey="Cherubini P" first="Paolo" last="Cherubini">Paolo Cherubini</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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